The GeneRIF (Gene References into Function) directory contains PubMed identifiers for articles describing the function of a single gene or interactions between products of two genes. The DATA directory contains files listing all data linked to GeneIDs along with subdirectories containing ASN.1 data for the Gene records. This site contains three directories: DATA, GeneRIF and tools. The protein sequences corresponding to the translations of coding sequences (CDS) in GenBank are collected for each GenBank release.Please see the README file in the directory for more information.
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The files are organized by GenBank division, and the full contents are described in the README.genbank file. This site contains files for all sequence records in GenBank in the default flat file format.
These databases must be formatted using formatdb before they can be used with BLAST. Sequence databases in FASTA format for use with the stand-alone BLAST programs. It contains files with information about standard terms used in ClinVar, MedGen, and GTR. This site provides full data extractions in XML and summary data in VCF format.
This site provides full data records for CDD, along with individual Position Specific Scoring Matrices (PSSMs), mFASTA sequences and annotation data for each conserved domain. The files in this directory are pre-formatted databases that are ready to use with BLAST. Sequence databases for use with the stand-alone BLAST programs. Pre-formatted databases for BLAST nucleotide, protein, and translated searches also are available for downloading under the db subdirectory. See the README file in the ftp directory for more information. BLAST executables for local use are provided for Solaris, LINUX, Windows, and MacOSX systems.
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